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Carnitine palmitoyltransferase II deficiency
Reviewed by Medicinsk Expert•Last updated: 2026-10-22•Condition

Carnitine palmitoyltransferase II deficiency

Carnitine palmitoyltransferase II (CPT II) deficiency blocks the use of certain fats for energy, especially during fasting, and presents in three severity‑graded forms.

Overview

Carnitine palmitoyltransferase II deficiency is a genetic disorder that prevents the body from using specific fats for energy, particularly during periods of fasting. The condition is classified into three main types that differ in severity and age of onset: a lethal neonatal form, a severe infantile hepatocardiomuscular form, and a myopathic form.

Symptoms

Lethal neonatal form

  • Respiratory failure
  • Liver failure
  • Cardiomyopathy (weak heart muscle)
  • Arrhythmia (irregular heartbeat)
  • Structural abnormalities of the brain and kidneys (in many cases)
  • Hypoketotic hypoglycemia (low blood glucose with low ketones)
  • Seizures or coma after prolonged fasting

Infants with this form usually survive only a few days to a few months.

Severe infantile hepatocardiomuscular form

  • Recurring hypoketotic hypoglycemia
  • Seizures
  • Liver dysfunction
  • Cardiomyopathy and arrhythmia
  • Myopathy (muscle weakness in arms and legs)
  • Triggers: fasting or viral infections
  • Risks: liver failure, nervous system damage, coma, sudden death

Myopathic form (least severe)

  • Recurrent muscle pain (myalgia)
  • Occasional muscle weakness associated with rhabdomyolysis
  • Myoglobinuria (red or brown urine due to excess myoglobin)
  • Triggers: exercise, stress, extreme temperatures, infections, fasting
  • First episode typically in childhood or adolescence
  • Variable severity and frequency; asymptomatic between episodes

Causes & Risk Factors

Pathogenic CPT2 gene variants cause CPT II deficiency. The CPT2 gene encodes the enzyme carnitine palmitoyltransferase 2, which is essential for fatty acid oxidation within mitochondria. Variants reduce enzyme activity, preventing removal of carnitine from long‑chain fatty acids. Consequently, long‑chain acylcarnitines accumulate, leading to the clinical features described above.

This condition is inherited in an autosomal recessive manner: both copies of the gene must carry pathogenic variants for disease manifestation. Parents are typically carriers without symptoms, though rare carriers may experience myopathic symptoms after strenuous activity.

Diagnosis

  • Newborn screening that detects elevated blood levels of long‑chain acylcarnitines.
  • Clinical evaluation of characteristic symptoms (e.g., hypoketotic hypoglycemia, myalgia, cardiomyopathy).
  • Genetic testing to identify pathogenic variants in the CPT2 gene.

Treatment & Management

  • Avoid long periods of fasting.
  • Limit intensive or prolonged exercise that may trigger rhabdomyolysis.
  • Prompt treatment of infections and other metabolic stressors.
  • Supportive care during acute episodes (e.g., glucose infusion to prevent hypoglycemia).
  • Genetic counseling for families.

Other Names

  • Carnitine palmitoyltransferase 2 deficiency
  • CPT II deficiency
  • CPT2 deficiency

Frequency

CPT II deficiency is rare. The lethal neonatal form has been reported in at least 20 families, the severe infantile hepatocardiomuscular form in approximately 30 families, and the myopathic form in more than 300 reported cases.

Frequently Asked Questions

Genetic counseling can explain inheritance patterns, recurrence risks, and testing options. A targeted CPT2 gene panel can be ordered for at-risk relatives. If you are asymptomatic, a carrier test may be offered, but many clinicians recommend functional testing (e.g., exercise tolerance, plasma acylcarnitine profile) to assess risk before making lifestyle or dietary changes.
While no drug fully restores CPT II activity, carnitine supplementation (often 1–3 g/day) can help, especially if plasma carnitine is low. Some patients benefit from vitamin B1 (thiamine) and coenzyme Q10, which support mitochondrial function. Always consult a metabolic specialist before starting any supplement.
Early signs include sudden muscle pain, weakness, or dark urine after exercise, stress, or a cold. If these occur, stop activity, hydrate, and consume a carbohydrate‑rich snack or drink. If symptoms worsen or you develop difficulty breathing, seek emergency care promptly, as rapid intervention can prevent rhabdomyolysis.
Limit high‑fat, high‑protein meals that rely on long‑chain fatty acids, especially during fasting or illness. Instead, consume moderate‑carbohydrate foods (e.g., rice, potatoes, fruits) and short‑chain or medium‑chain triglyceride (MCT) oils, which are metabolized without CPT II. A dietitian can help tailor a plan that balances energy needs while minimizing triggers.
Source: MedlinePlus, National Library of Medicine

MedlinePlus brings together authoritative health information from the National Library of Medicine (NLM), the National Institutes of Health (NIH), and other government agencies and health-related organizations.

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